Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CASQ2O14958 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
CASQ2O14958 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASQ2O14958 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.97■□□□□ 0.63
CASQ2O14958 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 MTDHP2-201ENST00000601468 714 ntBASIC18.97■□□□□ 0.63
CASQ2O14958 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CASQ2O14958 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASQ2O14958 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.97■□□□□ 0.63
CASQ2O14958 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CASQ2O14958 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CASQ2O14958 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CASQ2O14958 LINC01465-201ENST00000408887 1940 ntBASIC18.96■□□□□ 0.63
CASQ2O14958 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.96■□□□□ 0.63
CASQ2O14958 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CASQ2O14958 BX664725.1-201ENST00000438252 379 ntBASIC18.96■□□□□ 0.63
CASQ2O14958 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.96■□□□□ 0.63
CASQ2O14958 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.96■□□□□ 0.63
CASQ2O14958 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASQ2O14958 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.96■□□□□ 0.63
CASQ2O14958 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CASQ2O14958 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CASQ2O14958 MIR3181-201ENST00000578512 73 ntBASIC18.95■□□□□ 0.62
CASQ2O14958 AC005332.8-201ENST00000622750 2735 ntBASIC18.95■□□□□ 0.62
CASQ2O14958 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.95■□□□□ 0.62
CASQ2O14958 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASQ2O14958 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CASQ2O14958 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CASQ2O14958 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.94■□□□□ 0.62
CASQ2O14958 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CASQ2O14958 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CASQ2O14958 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASQ2O14958 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms