Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CDX4O14627 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDX4O14627 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
CDX4O14627 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 HMGA1P5-201ENST00000412453 271 ntBASIC19.38■□□□□ 0.69
CDX4O14627 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.38■□□□□ 0.69
CDX4O14627 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
CDX4O14627 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.38■□□□□ 0.69
CDX4O14627 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.38■□□□□ 0.69
CDX4O14627 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX4O14627 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDX4O14627 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.37■□□□□ 0.69
CDX4O14627 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDX4O14627 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CDX4O14627 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 AC004980.1-204ENST00000429707 299 ntBASIC19.37■□□□□ 0.69
CDX4O14627 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.37■□□□□ 0.69
CDX4O14627 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.37■□□□□ 0.69
CDX4O14627 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.37■□□□□ 0.69
CDX4O14627 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDX4O14627 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.37■□□□□ 0.69
CDX4O14627 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.37■□□□□ 0.69
CDX4O14627 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX4O14627 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.36■□□□□ 0.69
CDX4O14627 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.36■□□□□ 0.69
CDX4O14627 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.36■□□□□ 0.69
CDX4O14627 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
CDX4O14627 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDX4O14627 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDX4O14627 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
CDX4O14627 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDX4O14627 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.35■□□□□ 0.69
CDX4O14627 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.35■□□□□ 0.69
CDX4O14627 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.35■□□□□ 0.69
CDX4O14627 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.35■□□□□ 0.69
CDX4O14627 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.35■□□□□ 0.69
CDX4O14627 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDX4O14627 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.35■□□□□ 0.69
CDX4O14627 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
CDX4O14627 TSPY5P-201ENST00000426936 936 ntBASIC19.35■□□□□ 0.69
CDX4O14627 YBX1P2-201ENST00000489612 999 ntBASIC19.35■□□□□ 0.69
CDX4O14627 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDX4O14627 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.35■□□□□ 0.69
CDX4O14627 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.35■□□□□ 0.69
CDX4O14627 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.35■□□□□ 0.69
CDX4O14627 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.35■□□□□ 0.69
CDX4O14627 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDX4O14627 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CDX4O14627 KRT8P20-201ENST00000423953 1409 ntBASIC19.34■□□□□ 0.69
CDX4O14627 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 DUSP5P1-201ENST00000441325 1139 ntBASIC19.34■□□□□ 0.69
CDX4O14627 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDX4O14627 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CDX4O14627 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
CDX4O14627 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDX4O14627 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDX4O14627 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDX4O14627 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.33■□□□□ 0.69
CDX4O14627 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CDX4O14627 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms