Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
RPN13O13563 NOP9YJL010C 2001 nt1.44□□□□□ -2.18
RPN13O13563 FYV10YIL097W 1551 nt1.44□□□□□ -2.18
RPN13O13563 YML002WYML002W 2214 nt1.44□□□□□ -2.18
RPN13O13563 STF2YGR008C 255 nt1.43□□□□□ -2.18
RPN13O13563 TDA9YML081W 3756 nt1.42□□□□□ -2.18
RPN13O13563 YKL100W-AYKL100W-A 90 nt1.42□□□□□ -2.18
RPN13O13563 SMC1YFL008W 3678 nt1.42□□□□□ -2.18
RPN13O13563 snR190snR190 190 nt1.41□□□□□ -2.18
RPN13O13563 NUP188YML103C 4968 nt1.4□□□□□ -2.18
RPN13O13563 tS(GCU)Q1tS(GCU)Q1 86 nt1.4□□□□□ -2.19
RPN13O13563 WAR1YML076C 2835 nt1.4□□□□□ -2.19
RPN13O13563 APL3YBL037W 3078 nt1.39□□□□□ -2.19
RPN13O13563 SPC110YDR356W 2835 nt1.39□□□□□ -2.19
RPN13O13563 CDC39YCR093W 6327 nt1.38□□□□□ -2.19
RPN13O13563 KAP120YPL125W 3099 nt1.38□□□□□ -2.19
RPN13O13563 snR81snR81 201 nt1.38□□□□□ -2.19
RPN13O13563 tM(CAU)Q2tM(CAU)Q2 78 nt1.38□□□□□ -2.19
RPN13O13563 YOL019W-AYOL019W-A 153 nt1.38□□□□□ -2.19
RPN13O13563 MEC1YBR136W 7107 nt1.38□□□□□ -2.19
RPN13O13563 YIL142C-AYIL142C-A 333 nt1.37□□□□□ -2.19
RPN13O13563 YLR232WYLR232W 348 nt1.37□□□□□ -2.19
RPN13O13563 FAB1YFR019W 6837 nt1.37□□□□□ -2.19
RPN13O13563 SEC1YDR164C 2175 nt1.36□□□□□ -2.19
RPN13O13563 CHS1YNL192W 3396 nt1.35□□□□□ -2.19
RPN13O13563 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
RPN13O13563 SWI4YER111C 3282 nt1.33□□□□□ -2.2
RPN13O13563 RPL26BYGR034W 384 nt1.33□□□□□ -2.2
RPN13O13563 YJL127W-AYJL127W-A 117 nt1.33□□□□□ -2.2
RPN13O13563 RAD9YDR217C 3930 nt1.32□□□□□ -2.2
RPN13O13563 BIR1YJR089W 2865 nt1.32□□□□□ -2.2
RPN13O13563 tN(GUU)QtN(GUU)Q 71 nt1.31□□□□□ -2.2
RPN13O13563 YCS4YLR272C 3531 nt1.31□□□□□ -2.2
RPN13O13563 SEC3YER008C 4011 nt1.3□□□□□ -2.2
RPN13O13563 snR45snR45 172 nt1.3□□□□□ -2.2
RPN13O13563 YLR422WYLR422W 5799 nt1.3□□□□□ -2.2
RPN13O13563 FIG2YCR089W 4830 nt1.29□□□□□ -2.2
RPN13O13563 YLL066W-BYLL066W-B 171 nt1.29□□□□□ -2.2
RPN13O13563 YNL266WYNL266W 420 nt1.29□□□□□ -2.2
RPN13O13563 YBR072C-AYBR072C-A 162 nt1.29□□□□□ -2.2
RPN13O13563 YBR200W-AYBR200W-A 165 nt1.29□□□□□ -2.2
RPN13O13563 BUD3YCL014W 4911 nt1.29□□□□□ -2.2
RPN13O13563 YDL073WYDL073W 2955 nt1.28□□□□□ -2.2
RPN13O13563 BST1YFL025C 3090 nt1.28□□□□□ -2.2
RPN13O13563 YGR146C-AYGR146C-A 162 nt1.26□□□□□ -2.21
RPN13O13563 SXM1YDR395W 2835 nt1.26□□□□□ -2.21
RPN13O13563 CDC25YLR310C 4770 nt1.25□□□□□ -2.21
RPN13O13563 YNL284C-BYNL284C-B 5268 nt1.25□□□□□ -2.21
RPN13O13563 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
RPN13O13563 YAL037C-AYAL037C-A 93 nt1.23□□□□□ -2.21
RPN13O13563 EST2YLR318W 2655 nt1.23□□□□□ -2.21
RPN13O13563 NNF2YGR089W 2811 nt1.22□□□□□ -2.21
RPN13O13563 NUP145YGL092W 3954 nt1.22□□□□□ -2.21
RPN13O13563 SAC3YDR159W 3906 nt1.22□□□□□ -2.21
RPN13O13563 YOL083C-AYOL083C-A 141 nt1.22□□□□□ -2.21
RPN13O13563 YBL071C-BYBL071C-B 99 nt1.21□□□□□ -2.22
RPN13O13563 YPR160W-AYPR160W-A 81 nt1.21□□□□□ -2.22
RPN13O13563 SEC8YPR055W 3198 nt1.19□□□□□ -2.22
RPN13O13563 PRP16YKR086W 3216 nt1.19□□□□□ -2.22
RPN13O13563 UBP3YER151C 2739 nt1.18□□□□□ -2.22
RPN13O13563 REV3YPL167C 4515 nt1.18□□□□□ -2.22
RPN13O13563 RPS26AYGL189C 360 nt1.16□□□□□ -2.22
RPN13O13563 LAA1YJL207C 6045 nt1.16□□□□□ -2.22
RPN13O13563 MSH3YCR092C 3057 nt1.16□□□□□ -2.22
RPN13O13563 CAT8YMR280C 4302 nt1.15□□□□□ -2.22
RPN13O13563 snR62snR62 100 nt1.15□□□□□ -2.23
RPN13O13563 YLR399W-AYLR399W-A 105 nt1.14□□□□□ -2.23
RPN13O13563 BEM3YPL115C 3387 nt1.13□□□□□ -2.23
RPN13O13563 YBR196C-AYBR196C-A 150 nt1.12□□□□□ -2.23
RPN13O13563 SEC10YLR166C 2616 nt1.12□□□□□ -2.23
RPN13O13563 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
RPN13O13563 RKR1YMR247C 4689 nt1.11□□□□□ -2.23
RPN13O13563 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
RPN13O13563 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
RPN13O13563 MSN5YDR335W 3675 nt1.08□□□□□ -2.24
RPN13O13563 YSP1YHR155W 3687 nt1.07□□□□□ -2.24
RPN13O13563 YLR286W-AYLR286W-A 135 nt1.07□□□□□ -2.24
RPN13O13563 YOL164W-AYOL164W-A 183 nt1.06□□□□□ -2.24
RPN13O13563 BEM2YER155C 6504 nt1.06□□□□□ -2.24
RPN13O13563 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
RPN13O13563 GLG1YKR058W 1851 nt1.05□□□□□ -2.24
RPN13O13563 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
RPN13O13563 EST1YLR233C 2100 nt1.04□□□□□ -2.24
RPN13O13563 RPM2YML091C 3609 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)E1tH(GUG)E1 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)E2tH(GUG)E2 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)G1tH(GUG)G1 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)G2tH(GUG)G2 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)HtH(GUG)H 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)KtH(GUG)K 72 nt1.04□□□□□ -2.24
RPN13O13563 tH(GUG)MtH(GUG)M 72 nt1.04□□□□□ -2.24
RPN13O13563 YGR130CYGR130C 2451 nt1.04□□□□□ -2.24
RPN13O13563 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
RPN13O13563 YDR034C-AYDR034C-A 177 nt1.03□□□□□ -2.24
RPN13O13563 ULP2YIL031W 3105 nt1.03□□□□□ -2.24
RPN13O13563 ORC3YLL004W 1851 nt1.03□□□□□ -2.25
RPN13O13563 YPL060C-AYPL060C-A 3315 nt1.02□□□□□ -2.25
RPN13O13563 YGR240C-AYGR240C-A 201 nt1.01□□□□□ -2.25
RPN13O13563 ANS1YHR126C 480 nt1.01□□□□□ -2.25
RPN13O13563 CSE1YGL238W 2883 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms