Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.43■■□□□ 1.02
SOX1O00570 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.43■■□□□ 1.02
SOX1O00570 AC004980.1-204ENST00000429707 299 ntBASIC21.43■■□□□ 1.02
SOX1O00570 CCR12P-201ENST00000446203 998 ntBASIC21.43■■□□□ 1.02
SOX1O00570 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.43■■□□□ 1.02
SOX1O00570 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.43■■□□□ 1.02
SOX1O00570 AC010653.2-201ENST00000623505 997 ntBASIC21.43■■□□□ 1.02
SOX1O00570 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.43■■□□□ 1.02
SOX1O00570 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.43■■□□□ 1.02
SOX1O00570 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SOX1O00570 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SOX1O00570 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX1O00570 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX1O00570 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SOX1O00570 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX1O00570 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SOX1O00570 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.42■■□□□ 1.02
SOX1O00570 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.42■■□□□ 1.02
SOX1O00570 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.42■■□□□ 1.02
SOX1O00570 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.42■■□□□ 1.02
SOX1O00570 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.42■■□□□ 1.02
SOX1O00570 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.41■■□□□ 1.02
SOX1O00570 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.41■■□□□ 1.02
SOX1O00570 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 ZNF444P1-201ENST00000559497 298 ntBASIC21.41■■□□□ 1.02
SOX1O00570 C1QL1P1-201ENST00000568105 661 ntBASIC21.41■■□□□ 1.02
SOX1O00570 AC140113.3-201ENST00000605663 199 ntBASIC21.41■■□□□ 1.02
SOX1O00570 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
SOX1O00570 AL031008.1-201ENST00000619963 541 ntBASIC21.41■■□□□ 1.02
SOX1O00570 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SOX1O00570 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX1O00570 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SOX1O00570 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.4■■□□□ 1.02
SOX1O00570 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SOX1O00570 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SOX1O00570 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.4■■□□□ 1.02
SOX1O00570 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.4■■□□□ 1.02
SOX1O00570 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.4■■□□□ 1.02
SOX1O00570 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.4■■□□□ 1.02
SOX1O00570 AC104692.2-201ENST00000603054 253 ntBASIC21.4■■□□□ 1.02
SOX1O00570 AP000692.2-201ENST00000608391 879 ntBASIC21.4■■□□□ 1.02
SOX1O00570 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.4■■□□□ 1.02
SOX1O00570 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SOX1O00570 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX1O00570 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX1O00570 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.39■■□□□ 1.02
SOX1O00570 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.39■■□□□ 1.02
SOX1O00570 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX1O00570 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX1O00570 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.39■■□□□ 1.02
SOX1O00570 AC092338.2-201ENST00000568827 1415 ntBASIC21.39■■□□□ 1.02
SOX1O00570 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SOX1O00570 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX1O00570 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.39■■□□□ 1.01
SOX1O00570 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.39■■□□□ 1.01
SOX1O00570 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 AC112907.2-201ENST00000448639 330 ntBASIC21.39■■□□□ 1.01
SOX1O00570 AC092183.1-201ENST00000469884 875 ntBASIC21.39■■□□□ 1.01
SOX1O00570 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.39■■□□□ 1.01
SOX1O00570 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX1O00570 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.39■■□□□ 1.01
SOX1O00570 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SOX1O00570 LINC02084-201ENST00000606069 1096 ntBASIC21.39■■□□□ 1.01
SOX1O00570 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SOX1O00570 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.39■■□□□ 1.01
SOX1O00570 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX1O00570 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SOX1O00570 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SOX1O00570 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.38■■□□□ 1.01
SOX1O00570 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX1O00570 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX1O00570 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SOX1O00570 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX1O00570 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX1O00570 SLC25A1P2-201ENST00000430693 912 ntBASIC21.38■■□□□ 1.01
SOX1O00570 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms