Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.04■□□□□ 0.16
UPK2O00526 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK2O00526 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.03■□□□□ 0.16
UPK2O00526 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
UPK2O00526 KRT8P17-201ENST00000453110 1448 ntBASIC16.03■□□□□ 0.16
UPK2O00526 AC068338.2-201ENST00000563278 1430 ntBASIC16.03■□□□□ 0.16
UPK2O00526 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK2O00526 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.03■□□□□ 0.16
UPK2O00526 CNN2P6-201ENST00000439038 900 ntBASIC16.03■□□□□ 0.16
UPK2O00526 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 DUX4L16-201ENST00000555130 1264 ntBASIC16.03■□□□□ 0.16
UPK2O00526 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.03■□□□□ 0.16
UPK2O00526 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK2O00526 PTBP1P-201ENST00000554374 1601 ntBASIC16.03■□□□□ 0.16
UPK2O00526 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UPK2O00526 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UPK2O00526 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.03■□□□□ 0.16
UPK2O00526 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.03■□□□□ 0.16
UPK2O00526 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK2O00526 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UPK2O00526 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK2O00526 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UPK2O00526 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UPK2O00526 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
UPK2O00526 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
UPK2O00526 KRT18P68-201ENST00000392293 1000 ntBASIC16.02■□□□□ 0.16
UPK2O00526 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.02■□□□□ 0.16
UPK2O00526 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.02■□□□□ 0.16
UPK2O00526 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.02■□□□□ 0.16
UPK2O00526 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.02■□□□□ 0.16
UPK2O00526 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.02■□□□□ 0.16
UPK2O00526 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
UPK2O00526 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
UPK2O00526 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.02■□□□□ 0.15
UPK2O00526 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.02■□□□□ 0.15
UPK2O00526 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UPK2O00526 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.02■□□□□ 0.15
UPK2O00526 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 AC116562.4-201ENST00000641316 2276 ntBASIC16.01■□□□□ 0.15
UPK2O00526 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK2O00526 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UPK2O00526 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.01■□□□□ 0.15
UPK2O00526 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.01■□□□□ 0.15
UPK2O00526 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.01■□□□□ 0.15
UPK2O00526 AC105020.6-201ENST00000621523 1217 ntBASIC16.01■□□□□ 0.15
UPK2O00526 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 KRT16P6-202ENST00000425692 1426 ntBASIC16.01■□□□□ 0.15
UPK2O00526 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UPK2O00526 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.01■□□□□ 0.15
UPK2O00526 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UPK2O00526 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UPK2O00526 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16■□□□□ 0.15
UPK2O00526 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16■□□□□ 0.15
UPK2O00526 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16■□□□□ 0.15
UPK2O00526 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
UPK2O00526 AL031963.3-201ENST00000606441 850 ntBASIC16■□□□□ 0.15
UPK2O00526 AC011767.1-201ENST00000617410 1153 ntBASIC16■□□□□ 0.15
UPK2O00526 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
UPK2O00526 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UPK2O00526 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms