Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
AP4M1O00189 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4M1O00189 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4M1O00189 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4M1O00189 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4M1O00189 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4M1O00189 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4M1O00189 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4M1O00189 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4M1O00189 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 RAP2CP1-201ENST00000605103 478 ntBASIC16.42■□□□□ 0.22
AP4M1O00189 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4M1O00189 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4M1O00189 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4M1O00189 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP4M1O00189 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 AP000974.1-201ENST00000623909 2387 ntBASIC16.41■□□□□ 0.22
AP4M1O00189 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4M1O00189 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4M1O00189 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 AC005181.1-201ENST00000604782 1256 ntBASIC16.41■□□□□ 0.22
AP4M1O00189 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4M1O00189 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP4M1O00189 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 NEFHP1-201ENST00000412845 2629 ntBASIC16.41■□□□□ 0.22
AP4M1O00189 AC020916.1-201ENST00000587762 1774 ntBASIC16.41■□□□□ 0.22
AP4M1O00189 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP4M1O00189 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4M1O00189 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4M1O00189 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4M1O00189 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4M1O00189 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 MIR663A-201ENST00000385250 93 ntBASIC16.4■□□□□ 0.22
AP4M1O00189 CNN2P6-201ENST00000439038 900 ntBASIC16.4■□□□□ 0.22
AP4M1O00189 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4M1O00189 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
AP4M1O00189 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP4M1O00189 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4M1O00189 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4M1O00189 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
AP4M1O00189 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
AP4M1O00189 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
AP4M1O00189 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP4M1O00189 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4M1O00189 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
AP4M1O00189 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4M1O00189 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.39■□□□□ 0.21
AP4M1O00189 AL162412.1-201ENST00000567129 965 ntBASIC16.39■□□□□ 0.21
AP4M1O00189 AL591742.1-201ENST00000604433 565 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms