Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC112907.3-201ENST00000577781 2400 ntBASIC15.78■□□□□ 0.12
LINC01548A6NM66 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 AC128676.1-201ENST00000454392 318 ntBASIC15.78■□□□□ 0.12
LINC01548A6NM66 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01548A6NM66 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LINC01548A6NM66 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 HLA-G-202ENST00000376815 851 ntBASIC15.77■□□□□ 0.12
LINC01548A6NM66 HLA-G-203ENST00000376818 1127 ntBASIC15.77■□□□□ 0.12
LINC01548A6NM66 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 KRT18P29-201ENST00000397031 1267 ntBASIC15.77■□□□□ 0.12
LINC01548A6NM66 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01548A6NM66 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC01548A6NM66 TMEM191A-211ENST00000637163 1067 ntBASIC15.77■□□□□ 0.12
LINC01548A6NM66 AC073648.6-201ENST00000641589 218 ntBASIC15.77■□□□□ 0.12
LINC01548A6NM66 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01548A6NM66 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01548A6NM66 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01548A6NM66 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01548A6NM66 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01548A6NM66 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01548A6NM66 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01548A6NM66 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 PCDHAC2-203ENST00000615316 3011 ntBASIC15.76■□□□□ 0.11
LINC01548A6NM66 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 RPS2P52-201ENST00000469610 820 ntBASIC15.76■□□□□ 0.11
LINC01548A6NM66 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 ITM2C-210ENST00000620962 501 ntBASIC15.76■□□□□ 0.11
LINC01548A6NM66 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01548A6NM66 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LINC01548A6NM66 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 PRORSD1P-201ENST00000295112 541 ntBASIC15.75■□□□□ 0.11
LINC01548A6NM66 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01548A6NM66 POM121L13P-201ENST00000422362 380 ntBASIC15.75■□□□□ 0.11
LINC01548A6NM66 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01548A6NM66 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms