Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 AC007322.4-201ENST00000509611 723 ntBASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.1■□□□□ 0.81
TCRBV9S1A1TA0A576 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 NTF6G-201ENST00000591094 616 ntBASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 AC013268.1-206ENST00000638368 961 ntBASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 AC112229.1-201ENST00000639295 961 ntBASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV9S1A1TA0A576 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV9S1A1TA0A576 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 KRT8P17-201ENST00000453110 1448 ntBASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV9S1A1TA0A576 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV9S1A1TA0A576 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TCRBV9S1A1TA0A576 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms