Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC142381.4-202ENST00000563973 229 ntBASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 GCSHP5-201ENST00000443090 522 ntBASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.43□□□□□ -0.1
IGHV4-28A0A0C4DH34 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 KRT8P20-201ENST00000423953 1409 ntBASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 PTBP1P-201ENST00000554374 1601 ntBASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 RPS2P52-201ENST00000469610 820 ntBASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 C1QBPP2-201ENST00000528754 825 ntBASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 AL031963.3-201ENST00000606441 850 ntBASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGHV4-28A0A0C4DH34 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IGHV4-28A0A0C4DH34 RN7SL471P-201ENST00000580476 299 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms