Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV9-1A0A075B6T8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 AL354751.1-201ENST00000412768 1863 ntBASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 BICD1-207ENST00000551848 1962 ntBASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-1A0A075B6T8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-1A0A075B6T8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 pRNA.6-201ENST00000610482 90 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 pRNA.5-201ENST00000612139 90 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 pRNA.11-201ENST00000618423 90 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 pRNA.13-201ENST00000619112 90 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 AC104581.1-202ENST00000635932 2618 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 PRORSD1P-202ENST00000563365 2154 ntBASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV9-1A0A075B6T8 AL133373.2-201ENST00000623187 2828 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms