Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 AC002090.1-201ENST00000625000 2138 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC9.05□□□□□ -0.96
COL15A1P39059 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
COL15A1P39059 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.05□□□□□ -0.96
COL15A1P39059 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 RN7SKP171-201ENST00000364417 303 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 RN7SKP187-201ENST00000365536 330 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.04□□□□□ -0.96
COL15A1P39059 RPLP1P10-201ENST00000413972 339 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 RPL7AP51-201ENST00000422016 760 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 AHCYP8-201ENST00000425108 209 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 AL031681.1-201ENST00000443304 400 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 RPS18P1-201ENST00000447840 458 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 AL445991.1-201ENST00000450381 475 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 AL096803.1-201ENST00000456921 1021 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 SNORA81.1-201ENST00000458922 177 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 RPL29P23-201ENST00000486188 442 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 KATNBL1P4-201ENST00000503545 918 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC9.04□□□□□ -0.96
COL15A1P39059 AC011447.2-201ENST00000592921 283 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 AC011500.1-201ENST00000601963 469 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
COL15A1P39059 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC9.04□□□□□ -0.96
COL15A1P39059 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
COL15A1P39059 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
COL15A1P39059 AL133320.1-201ENST00000621423 2352 ntBASIC9.04□□□□□ -0.96
COL15A1P39059 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 AP003972.1-201ENST00000625192 5446 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 OR7E25P-202ENST00000641088 5937 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
COL15A1P39059 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 RNU1-5P-201ENST00000362684 144 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC9.03□□□□□ -0.96
COL15A1P39059 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC9.03□□□□□ -0.96
COL15A1P39059 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC9.03□□□□□ -0.96
COL15A1P39059 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC9.03□□□□□ -0.96
COL15A1P39059 PSPC1P2-201ENST00000455130 225 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 RN7SL568P-201ENST00000493069 298 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 OR7E154P-201ENST00000525174 932 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 AC073488.2-201ENST00000631903 751 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC9.03□□□□□ -0.96
COL15A1P39059 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 AP002991.2-201ENST00000623807 2801 ntBASIC9.03□□□□□ -0.96
COL15A1P39059 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
COL15A1P39059 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
COL15A1P39059 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
COL15A1P39059 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms