Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
ATG4DQ86TL0 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PSMC1P3-201ENST00000453822 1318 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC110998.1-201ENST00000519029 2053 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 RN7SKP208-201ENST00000365474 361 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL034372.1-201ENST00000407586 754 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 UPF3AP1-201ENST00000413731 1126 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CDY17P-201ENST00000414121 1282 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CDY8P-201ENST00000428380 1279 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL354893.1-201ENST00000433735 348 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC097527.1-201ENST00000437031 530 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CLUHP5-201ENST00000438421 774 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 ACTP1-201ENST00000440793 383 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OR10R1P-201ENST00000441524 1141 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 UBE2D3P4-201ENST00000441973 436 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OR2L9P-201ENST00000444456 913 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 EEF1B2P5-201ENST00000444820 548 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CDY20P-201ENST00000447528 1279 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 DBIL5P-202ENST00000453414 250 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 RPS3AP43-201ENST00000479743 781 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 RN7SL505P-201ENST00000482644 293 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC008565.1-201ENST00000509046 885 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OR10V3P-201ENST00000525712 725 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AP001636.1-201ENST00000531997 1122 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC092865.1-201ENST00000544395 1023 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC008759.3-201ENST00000613300 508 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC138207.6-201ENST00000579164 1967 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 TDGF1P3-202ENST00000602699 2710 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 MAPK10-319ENST00000641459 2542 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 AC092718.7-201ENST00000623577 1776 ntBASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
ATG4DQ86TL0 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 AC105046.1-201ENST00000566457 4997 ntBASIC7.32□□□□□ -1.24
ATG4DQ86TL0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.32□□□□□ -1.24
ATG4DQ86TL0 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms