RNA–Protein interactions for RNA: ENST00000564830.2

LINC02544-201, Transcript of long intergenic non-protein coding RNA 2544, humanhuman

TSL 1 (best) BASIC

Gene LINC02544, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02544-201ENST00000564830 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
LINC02544-201ENST00000564830 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
LINC02544-201ENST00000564830 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
LINC02544-201ENST00000564830 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
LINC02544-201ENST00000564830 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
LINC02544-201ENST00000564830 FOXD1Q16676 465 aa19.99■□□□□ 0.79
LINC02544-201ENST00000564830 ADRA2BP18089 450 aa19.21■□□□□ 0.67
LINC02544-201ENST00000564830 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
LINC02544-201ENST00000564830 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
LINC02544-201ENST00000564830 NISCHQ9Y2I1 1504 aa18.56■□□□□ 0.56
LINC02544-201ENST00000564830 MSH5O43196 834 aa18.47■□□□□ 0.55
LINC02544-201ENST00000564830 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
LINC02544-201ENST00000564830 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
LINC02544-201ENST00000564830 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
LINC02544-201ENST00000564830 KCNA4P22459 653 aa17.3■□□□□ 0.36
LINC02544-201ENST00000564830 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
LINC02544-201ENST00000564830 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
LINC02544-201ENST00000564830 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
LINC02544-201ENST00000564830 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
LINC02544-201ENST00000564830 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
LINC02544-201ENST00000564830 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
LINC02544-201ENST00000564830 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
LINC02544-201ENST00000564830 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
LINC02544-201ENST00000564830 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
LINC02544-201ENST00000564830 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
LINC02544-201ENST00000564830 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
LINC02544-201ENST00000564830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC02544-201ENST00000564830 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
LINC02544-201ENST00000564830 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
LINC02544-201ENST00000564830 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
LINC02544-201ENST00000564830 ZBTB22O15209 634 aa15.89■□□□□ 0.13
LINC02544-201ENST00000564830 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
LINC02544-201ENST00000564830 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
LINC02544-201ENST00000564830 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
LINC02544-201ENST00000564830 ABCC9O60706 1549 aa15.76■□□□□ 0.11
LINC02544-201ENST00000564830 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
LINC02544-201ENST00000564830 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
LINC02544-201ENST00000564830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
LINC02544-201ENST00000564830 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
LINC02544-201ENST00000564830 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
LINC02544-201ENST00000564830 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
LINC02544-201ENST00000564830 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
LINC02544-201ENST00000564830 APLP2Q06481 763 aa15.47■□□□□ 0.07
LINC02544-201ENST00000564830 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
LINC02544-201ENST00000564830 ATXN8OSP0DMR3 200 aa15.37■□□□□ 0.05
LINC02544-201ENST00000564830 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
LINC02544-201ENST00000564830 CAPN15O75808 1086 aa15.32■□□□□ 0.04
LINC02544-201ENST00000564830 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
LINC02544-201ENST00000564830 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
LINC02544-201ENST00000564830 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
LINC02544-201ENST00000564830 NACADO15069 1562 aa15.24■□□□□ 0.03
LINC02544-201ENST00000564830 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
LINC02544-201ENST00000564830 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
LINC02544-201ENST00000564830 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
LINC02544-201ENST00000564830 SHROOM4Q9ULL8 1493 aa15.11■□□□□ 0.01
LINC02544-201ENST00000564830 SCRIBQ14160 1630 aa15.05■□□□□ -0
LINC02544-201ENST00000564830 DSG3P32926 999 aa15.03■□□□□ -0
LINC02544-201ENST00000564830 ABCB7O75027 752 aa15.02■□□□□ -0
LINC02544-201ENST00000564830 POLA2Q14181 598 aa14.98□□□□□ -0.01
LINC02544-201ENST00000564830 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
LINC02544-201ENST00000564830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC02544-201ENST00000564830 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
LINC02544-201ENST00000564830 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
LINC02544-201ENST00000564830 FBLN2P98095 1184 aa14.7□□□□□ -0.06
LINC02544-201ENST00000564830 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
LINC02544-201ENST00000564830 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
LINC02544-201ENST00000564830 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
LINC02544-201ENST00000564830 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
LINC02544-201ENST00000564830 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
LINC02544-201ENST00000564830 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
LINC02544-201ENST00000564830 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
LINC02544-201ENST00000564830 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
LINC02544-201ENST00000564830 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
LINC02544-201ENST00000564830 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
LINC02544-201ENST00000564830 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
LINC02544-201ENST00000564830 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
LINC02544-201ENST00000564830 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
LINC02544-201ENST00000564830 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
LINC02544-201ENST00000564830 FKBP8Q14318 412 aa14.31□□□□□ -0.12
LINC02544-201ENST00000564830 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
LINC02544-201ENST00000564830 WIZO95785 1651 aa14.23□□□□□ -0.13
LINC02544-201ENST00000564830 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
LINC02544-201ENST00000564830 SSUH2Q9Y2M2 353 aa14.19□□□□□ -0.14
LINC02544-201ENST00000564830 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
LINC02544-201ENST00000564830 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
LINC02544-201ENST00000564830 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
LINC02544-201ENST00000564830 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
LINC02544-201ENST00000564830 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
LINC02544-201ENST00000564830 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
LINC02544-201ENST00000564830 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
LINC02544-201ENST00000564830 PROM2Q8N271 834 aa14.03□□□□□ -0.16
LINC02544-201ENST00000564830 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
LINC02544-201ENST00000564830 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
LINC02544-201ENST00000564830 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
LINC02544-201ENST00000564830 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
LINC02544-201ENST00000564830 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
LINC02544-201ENST00000564830 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
LINC02544-201ENST00000564830 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
LINC02544-201ENST00000564830 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
LINC02544-201ENST00000564830 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms