Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 FAM192A-203ENST00000562324 597 ntTSL 27.74□□□□□ -1.172e-6■□□□□ 11.2
PRPF8Q6P2Q9 KANK1-201ENST00000354485 6912 ntTSL 26.34□□□□□ -1.393e-7■□□□□ 11.2
PRPF8Q6P2Q9 EIF6-208ENST00000462894 453 ntTSL 322.63■■□□□ 1.217e-13■□□□□ 11.2
PRPF8Q6P2Q9 EIF6-207ENST00000456600 551 ntTSL 318.48■□□□□ 0.557e-13■□□□□ 11.2
PRPF8Q6P2Q9 GALK1-208ENST00000592494 1121 ntTSL 516.87■□□□□ 0.297e-13■□□□□ 11.2
PRPF8Q6P2Q9 GALK1-202ENST00000586244 1180 ntTSL 1 (best)16.67■□□□□ 0.267e-13■□□□□ 11.2
PRPF8Q6P2Q9 GALK1-204ENST00000587707 667 ntTSL 513.45□□□□□ -0.267e-13■□□□□ 11.2
PRPF8Q6P2Q9 GPR108-217ENST00000601716 670 ntTSL 516.03■□□□□ 0.164e-7■□□□□ 11.2
PRPF8Q6P2Q9 GPR108-210ENST00000597298 765 ntTSL 515.86■□□□□ 0.134e-7■□□□□ 11.2
PRPF8Q6P2Q9 GPR108-212ENST00000598052 671 ntTSL 313.11□□□□□ -0.314e-7■□□□□ 11.2
PRPF8Q6P2Q9 NAA40-210ENST00000545161 351 ntTSL 35.3□□□□□ -1.566e-14■□□□□ 11.2
PRPF8Q6P2Q9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.25□□□□□ -0.455e-7■□□□□ 11.2
PRPF8Q6P2Q9 VARS2-202ENST00000421263 460 ntTSL 216.32■□□□□ 0.24e-8■□□□□ 11.2
PRPF8Q6P2Q9 EHBP1-216ENST00000471179 588 ntTSL 216.04■□□□□ 0.163e-7■□□□□ 11.2
PRPF8Q6P2Q9 TSC2-214ENST00000488675 567 ntTSL 214.52□□□□□ -0.081e-6■□□□□ 11.2
PRPF8Q6P2Q9 DNMT3A-213ENST00000484184 619 ntTSL 311.59□□□□□ -0.555e-8■□□□□ 11.2
PRPF8Q6P2Q9 LAMTOR1-205ENST00000539797 535 ntTSL 510.26□□□□□ -0.775e-14■□□□□ 11.2
PRPF8Q6P2Q9 LAMTOR1-207ENST00000544594 849 ntTSL 37.45□□□□□ -1.225e-14■□□□□ 11.2
PRPF8Q6P2Q9 TCIRG1-215ENST00000533947 956 ntTSL 518■□□□□ 0.476e-7■□□□□ 11.2
PRPF8Q6P2Q9 TCIRG1-209ENST00000529657 842 ntTSL 517.47■□□□□ 0.396e-7■□□□□ 11.2
PRPF8Q6P2Q9 TBX2-203ENST00000477081 5218 ntTSL 215.6■□□□□ 0.095e-7■□□□□ 11.2
PRPF8Q6P2Q9 TBX2-202ENST00000419047 3344 ntTSL 1 (best)14.87□□□□□ -0.035e-7■□□□□ 11.2
PRPF8Q6P2Q9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.215e-7■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.07□□□□□ -0.162e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-222ENST00000494302 2667 ntTSL 513.52□□□□□ -0.242e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-207ENST00000420383 2817 ntTSL 213.24□□□□□ -0.292e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-205ENST00000404127 3232 ntTSL 513.05□□□□□ -0.322e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-219ENST00000470209 2889 ntTSL 512.86□□□□□ -0.352e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.522e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.562e-14■□□□□ 11.2
PRPF8Q6P2Q9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.62e-14■□□□□ 11.2
PRPF8Q6P2Q9 TCF25-218ENST00000566283 515 ntTSL 215.23■□□□□ 0.037e-7■□□□□ 11.2
PRPF8Q6P2Q9 TCF25-220ENST00000567171 1535 ntTSL 214.03□□□□□ -0.167e-7■□□□□ 11.2
PRPF8Q6P2Q9 NKIRAS2-212ENST00000585955 564 ntTSL 49.42□□□□□ -0.92e-6■□□□□ 11.2
PRPF8Q6P2Q9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.59□□□□□ -0.392e-6■□□□□ 11.2
PRPF8Q6P2Q9 CYP2W1-204ENST00000462453 566 ntTSL 414.36□□□□□ -0.112e-27■□□□□ 11.2
PRPF8Q6P2Q9 GDPD5-216ENST00000533911 603 ntTSL 410.46□□□□□ -0.743e-9■□□□□ 11.2
PRPF8Q6P2Q9 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.81□□□□□ -1.163e-8■□□□□ 11.2
PRPF8Q6P2Q9 HDLBP-247ENST00000498595 595 ntTSL 512.33□□□□□ -0.448e-9■□□□□ 11.2
PRPF8Q6P2Q9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.4□□□□□ -0.262e-6■□□□□ 11.2
PRPF8Q6P2Q9 MLXIPL-209ENST00000467221 774 ntTSL 59.16□□□□□ -0.944e-20■□□□□ 11.2
PRPF8Q6P2Q9 CCNT2-209ENST00000464932 723 ntTSL 34.13□□□□□ -1.754e-7■□□□□ 11.2
PRPF8Q6P2Q9 CYB5R3-207ENST00000466276 581 ntTSL 411.49□□□□□ -0.573e-13■□□□□ 11.2
PRPF8Q6P2Q9 RNF213-216ENST00000573548 616 ntTSL 210.69□□□□□ -0.72e-7■□□□□ 11.2
PRPF8Q6P2Q9 ASPSCR1-220ENST00000585140 447 ntTSL 316.17■□□□□ 0.185e-13■□□□□ 11.2
PRPF8Q6P2Q9 ASPSCR1-214ENST00000582404 534 ntTSL 315.42■□□□□ 0.065e-13■□□□□ 11.2
PRPF8Q6P2Q9 ASPSCR1-217ENST00000583693 3976 ntTSL 211.15□□□□□ -0.625e-13■□□□□ 11.2
PRPF8Q6P2Q9 ASPSCR1-215ENST00000583142 532 ntTSL 39.89□□□□□ -0.835e-13■□□□□ 11.2
PRPF8Q6P2Q9 DHPS-214ENST00000598246 553 ntTSL 310.64□□□□□ -0.711e-7■□□□□ 11.2
PRPF8Q6P2Q9 DHPS-220ENST00000600864 464 ntTSL 59.26□□□□□ -0.931e-7■□□□□ 11.2
PRPF8Q6P2Q9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.81■□□□□ 0.446e-6■□□□□ 11.2
PRPF8Q6P2Q9 ARHGEF7-215ENST00000483189 1205 ntTSL 215.86■□□□□ 0.136e-6■□□□□ 11.2
PRPF8Q6P2Q9 AHDC1-203ENST00000480033 546 ntTSL 515.67■□□□□ 0.12e-6■□□□□ 11.2
PRPF8Q6P2Q9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.35■□□□□ 0.056e-6■□□□□ 11.2
PRPF8Q6P2Q9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.24■□□□□ 0.036e-6■□□□□ 11.2
PRPF8Q6P2Q9 RNF7-203ENST00000477012 1036 ntTSL 1 (best)14.24□□□□□ -0.136e-8■□□□□ 11.2
PRPF8Q6P2Q9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.236e-8■□□□□ 11.2
PRPF8Q6P2Q9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.256e-6■□□□□ 11.2
PRPF8Q6P2Q9 RNF7-204ENST00000477393 862 ntTSL 213.33□□□□□ -0.286e-8■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-205ENST00000462977 1165 ntTSL 212.86□□□□□ -0.354e-12■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-211ENST00000494216 892 ntTSL 312.54□□□□□ -0.44e-12■□□□□ 11.2
PRPF8Q6P2Q9 PLD1-205ENST00000440204 646 ntTSL 411.35□□□□□ -0.591e-6■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-203ENST00000460611 514 ntTSL 310.98□□□□□ -0.654e-12■□□□□ 11.2
PRPF8Q6P2Q9 RNF7-205ENST00000480908 782 ntTSL 4 BASIC10.91□□□□□ -0.666e-8■□□□□ 11.2
PRPF8Q6P2Q9 RNF7-202ENST00000393000 805 ntTSL 2 BASIC10.52□□□□□ -0.736e-8■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-218ENST00000541818 1193 ntTSL 29.57□□□□□ -0.884e-12■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-215ENST00000537523 734 ntTSL 39.21□□□□□ -0.944e-12■□□□□ 11.2
PRPF8Q6P2Q9 PPOX-216ENST00000537829 728 ntTSL 29.09□□□□□ -0.954e-12■□□□□ 11.2
PRPF8Q6P2Q9 TRMT2A-210ENST00000464535 943 ntTSL 216.9■□□□□ 0.37e-9■□□□□ 11.2
PRPF8Q6P2Q9 TRMT2A-219ENST00000494641 1060 ntTSL 315.52■□□□□ 0.087e-9■□□□□ 11.2
PRPF8Q6P2Q9 UCKL1-205ENST00000483710 524 ntTSL 39.15□□□□□ -0.943e-17■□□□□ 11.2
PRPF8Q6P2Q9 MLXIPL-207ENST00000453275 690 ntTSL 516.87■□□□□ 0.291e-26■□□□□ 11.2
PRPF8Q6P2Q9 GREB1-208ENST00000470980 833 ntTSL 37.34□□□□□ -1.231e-10■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.291e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.071e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.091e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.8□□□□□ -0.21e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.271e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.371e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.421e-6■□□□□ 11.2
PRPF8Q6P2Q9 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.561e-6■□□□□ 11.2
PRPF8Q6P2Q9 CHD6-208ENST00000480022 2829 ntTSL 27.92□□□□□ -1.144e-9■□□□□ 11.2
PRPF8Q6P2Q9 HNRNPD-205ENST00000507010 748 ntTSL 321.43■■□□□ 1.029e-9■□□□□ 11.2
PRPF8Q6P2Q9 HNRNPD-204ENST00000503822 607 ntTSL 519.65■□□□□ 0.749e-9■□□□□ 11.2
PRPF8Q6P2Q9 HNRNPD-207ENST00000509107 583 ntTSL 517.61■□□□□ 0.419e-9■□□□□ 11.2
PRPF8Q6P2Q9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.079e-9■□□□□ 11.2
PRPF8Q6P2Q9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.359e-9■□□□□ 11.2
PRPF8Q6P2Q9 HNRNPD-212ENST00000515432 545 ntTSL 56.99□□□□□ -1.299e-9■□□□□ 11.2
PRPF8Q6P2Q9 LRP1-203ENST00000451724 1284 ntTSL 515.04■□□□□ -04e-9■□□□□ 11.2
PRPF8Q6P2Q9 ERGIC3-213ENST00000475211 514 ntTSL 311.41□□□□□ -0.581e-14■□□□□ 11.2
PRPF8Q6P2Q9 CENPC-202ENST00000506410 692 ntTSL 21.83□□□□□ -2.122e-6■□□□□ 11.2
PRPF8Q6P2Q9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.76□□□□□ -2.534e-12■□□□□ 11.2
PRPF8Q6P2Q9 TRAP1-203ENST00000570403 521 ntTSL 419.51■□□□□ 0.711e-6■□□□□ 11.2
PRPF8Q6P2Q9 TRAP1-205ENST00000571011 480 ntTSL 518.43■□□□□ 0.541e-6■□□□□ 11.2
PRPF8Q6P2Q9 STARD10-203ENST00000535054 460 ntTSL 321.25■□□□□ 0.997e-10■□□□□ 11.2
PRPF8Q6P2Q9 STARD10-206ENST00000536290 438 ntTSL 515.03■□□□□ -07e-10■□□□□ 11.2
PRPF8Q6P2Q9 STARD10-211ENST00000538009 985 ntTSL 1 (best)14.16□□□□□ -0.147e-10■□□□□ 11.2
PRPF8Q6P2Q9 STARD10-207ENST00000536377 798 ntTSL 512.08□□□□□ -0.487e-10■□□□□ 11.2
PRPF8Q6P2Q9 METTL22-205ENST00000562151 520 ntTSL 511.32□□□□□ -0.64e-9■□□□□ 11.2
PRPF8Q6P2Q9 METTL22-214ENST00000565866 561 ntTSL 310.4□□□□□ -0.744e-9■□□□□ 11.2
Retrieved 100 of 73,762 protein–RNA pairs in 898.6 ms