Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR7E25P-202ENST00000641088 5937 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 SNORA3.1-201ENST00000408166 111 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 OR52S1P-201ENST00000427016 937 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 EIF3LP2-201ENST00000457262 807 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 RN7SL251P-201ENST00000464175 297 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.56□□□□□ -1.36
FREM3P0C091 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 RPS7P1-201ENST00000571702 585 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AC010327.2-201ENST00000587647 488 ntBASIC6.56□□□□□ -1.36
FREM3P0C091 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.56□□□□□ -1.36
FREM3P0C091 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.56□□□□□ -1.36
FREM3P0C091 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FREM3P0C091 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
FREM3P0C091 GEMIN2P2-201ENST00000418195 715 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 AL356133.1-201ENST00000444762 372 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 RN7SL180P-201ENST00000466769 294 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 RPL23AP8-201ENST00000479812 475 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 RN7SL152P-201ENST00000484176 298 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 ST13P6-201ENST00000522430 1102 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 RBMS2P1-201ENST00000525031 1226 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 TRIM64EP-201ENST00000531233 1307 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 AC134879.1-201ENST00000426062 394 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 GTF2F2P2-201ENST00000445825 721 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 OR5M4P-201ENST00000529436 925 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.55□□□□□ -1.36
FREM3P0C091 AC099777.1-201ENST00000603779 1070 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AL031777.2-201ENST00000611953 196 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 AC016542.3-201ENST00000623520 619 ntBASIC6.55□□□□□ -1.36
FREM3P0C091 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.55□□□□□ -1.36
FREM3P0C091 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.55□□□□□ -1.36
FREM3P0C091 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
FREM3P0C091 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 AL512353.3-201ENST00000417517 1326 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 AL355974.1-201ENST00000618896 1708 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
FREM3P0C091 AC138915.4-201ENST00000565549 4147 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms