Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP003385.3-201ENST00000472498 287 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC098818.1-201ENST00000478593 252 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC9.13□□□□□ -0.95
COL15A1P39059 IGLVI-42-201ENST00000522485 381 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 AL137000.1-201ENST00000610528 1244 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 PAH-201ENST00000307000 2466 ntTSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 EEF1A1P20-201ENST00000514852 1386 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 AC008555.1-201ENST00000561778 2757 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 AC095038.1-201ENST00000429248 1591 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
COL15A1P39059 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC9.13□□□□□ -0.95
COL15A1P39059 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 OR51A10P-201ENST00000307165 937 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
COL15A1P39059 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 RNA5SP472-201ENST00000363868 119 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
COL15A1P39059 SUMO2P13-201ENST00000403109 272 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AL079341.1-201ENST00000404701 1207 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
COL15A1P39059 SPATA20P1-201ENST00000423089 438 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC9.12□□□□□ -0.95
COL15A1P39059 ANKRD54P1-201ENST00000433115 471 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC245047.5-201ENST00000437312 556 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AGKP1-201ENST00000455254 1263 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC137549.1-201ENST00000514243 533 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 MINOS1P4-201ENST00000515470 318 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC9.12□□□□□ -0.95
COL15A1P39059 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC9.12□□□□□ -0.95
COL15A1P39059 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC9.12□□□□□ -0.95
COL15A1P39059 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 AC013283.1-201ENST00000557282 492 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AL132640.1-201ENST00000559594 619 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC9.12□□□□□ -0.95
COL15A1P39059 PRR13P5-201ENST00000596581 442 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC9.12□□□□□ -0.95
COL15A1P39059 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 AC098590.2-201ENST00000614787 281 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 TMEM14EP-202ENST00000639378 1296 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 CAP1P2-201ENST00000417455 1409 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC9.12□□□□□ -0.95
COL15A1P39059 AL033519.1-201ENST00000407266 307 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 LINC00328-2P-201ENST00000436585 219 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 E2F6P3-201ENST00000441743 743 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 OR7A15P-201ENST00000449848 1009 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC9.12□□□□□ -0.95
COL15A1P39059 RN7SL325P-201ENST00000460434 283 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 AC138517.1-201ENST00000515724 568 ntBASIC9.12□□□□□ -0.95
COL15A1P39059 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC9.12□□□□□ -0.95
COL15A1P39059 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
COL15A1P39059 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms