Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KRT8P17-201ENST00000453110 1448 ntBASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 PNMA6B-201ENST00000538162 1200 ntBASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 KRT8P20-201ENST00000423953 1409 ntBASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI2Q9Y5P3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 HLA-G-202ENST00000376815 851 ntBASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 HLA-G-203ENST00000376818 1127 ntBASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 AC005829.2-201ENST00000571422 1056 ntBASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAI2Q9Y5P3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 AL390719.1-204ENST00000412397 1219 ntBASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI2Q9Y5P3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms