Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRRAPQ9Y4A5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
TRRAPQ9Y4A5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.32■□□□□ 0.04
TRRAPQ9Y4A5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRRAPQ9Y4A5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRRAPQ9Y4A5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 HCG4P8-203ENST00000443049 980 ntBASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 SLC25A1P4-201ENST00000567977 778 ntBASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 GPALPP1-207ENST00000611650 899 ntBASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 DGCR10-201ENST00000609839 495 ntBASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRRAPQ9Y4A5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AC023632.3-201ENST00000521633 145 ntBASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 RNF152P1-201ENST00000397754 604 ntBASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AL138966.2-201ENST00000621997 464 ntBASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.29■□□□□ 0.04
TRRAPQ9Y4A5 AC091390.4-202ENST00000476426 537 ntBASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 YBX1P2-201ENST00000489612 999 ntBASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 AC130371.2-201ENST00000619443 611 ntBASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 AC127496.7-201ENST00000625110 1798 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms