Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.71■□□□□ 0.59
SAMD4AQ9UPU9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.71■□□□□ 0.58
SAMD4AQ9UPU9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.71■□□□□ 0.58
SAMD4AQ9UPU9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.71■□□□□ 0.58
SAMD4AQ9UPU9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 CDV3P1-201ENST00000471403 739 ntBASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAMD4AQ9UPU9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 AC027612.3-201ENST00000413684 1047 ntBASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 AC097381.1-201ENST00000429019 1296 ntBASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 SUDS3P1-201ENST00000505831 966 ntBASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAMD4AQ9UPU9 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAMD4AQ9UPU9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 Z82202.1-201ENST00000623446 1880 ntBASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.67■□□□□ 0.58
SAMD4AQ9UPU9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms