Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN11Q9UMQ6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN11Q9UMQ6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CAPN11Q9UMQ6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 ZNRF2P3-201ENST00000424200 374 ntBASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 AC016405.3-201ENST00000607710 860 ntBASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 KRT8P17-201ENST00000453110 1448 ntBASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN11Q9UMQ6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 AC007322.4-201ENST00000509611 723 ntBASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CAPN11Q9UMQ6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN11Q9UMQ6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 Z82202.1-201ENST00000623446 1880 ntBASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN11Q9UMQ6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms