Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 AC068418.2-201ENST00000577309 3703 ntBASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 SIRPAP1-201ENST00000448467 1770 ntBASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 AC092028.1-203ENST00000608262 953 ntBASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM4Q9UKN5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM4Q9UKN5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM4Q9UKN5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM4Q9UKN5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.64■□□□□ 0.9
PRDM4Q9UKN5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM4Q9UKN5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 AC080080.1-201ENST00000625121 2420 ntBASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 AC005703.6-201ENST00000623265 1329 ntBASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM4Q9UKN5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 RARRES2P1-201ENST00000474487 481 ntBASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRDM4Q9UKN5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms