Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCDNQ9UBB6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 AL450487.1-201ENST00000426799 995 ntBASIC19.92■□□□□ 0.78
NCDNQ9UBB6 AC009947.2-201ENST00000444014 672 ntBASIC19.92■□□□□ 0.78
NCDNQ9UBB6 AC128688.1-201ENST00000487626 519 ntBASIC19.92■□□□□ 0.78
NCDNQ9UBB6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 AP000550.4-202ENST00000639755 178 ntBASIC19.92■□□□□ 0.78
NCDNQ9UBB6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
NCDNQ9UBB6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 NIFKP9-201ENST00000419265 221 ntBASIC19.91■□□□□ 0.78
NCDNQ9UBB6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 EGLN1P1-201ENST00000531623 762 ntBASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCDNQ9UBB6 AC127496.7-201ENST00000625110 1798 ntBASIC19.9■□□□□ 0.78
NCDNQ9UBB6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.9■□□□□ 0.78
NCDNQ9UBB6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCDNQ9UBB6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCDNQ9UBB6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCDNQ9UBB6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCDNQ9UBB6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCDNQ9UBB6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms