Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.88■■■□□ 2.21
SLC52A1Q9NWF4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
SLC52A1Q9NWF4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.88■■■□□ 2.21
SLC52A1Q9NWF4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 AC010203.1-204ENST00000548782 407 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 NTF6B-201ENST00000591913 560 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 GRAMD4P8-201ENST00000605465 1115 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 DGCR10-201ENST00000609839 495 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 AL049796.1-201ENST00000565336 1766 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 Z98882.1-201ENST00000622160 2253 ntBASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SLC52A1Q9NWF4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 KRT8P17-201ENST00000453110 1448 ntBASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 ABBA01031674.1-201ENST00000635145 728 ntBASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SLC52A1Q9NWF4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 TSPY14P-201ENST00000303979 915 ntBASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 EGLN1P1-201ENST00000531623 762 ntBASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SLC52A1Q9NWF4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC28.84■■■□□ 2.21
SLC52A1Q9NWF4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 B3GAT3P1-201ENST00000471720 806 ntBASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 C2orf69P3-201ENST00000565542 1120 ntBASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 AC006011.2-201ENST00000621313 1158 ntBASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 H19-201ENST00000411754 1788 ntTSL 5 BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC52A1Q9NWF4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 AP006587.1-201ENST00000534129 1502 ntBASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SLC52A1Q9NWF4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC28.81■■■□□ 2.2
SLC52A1Q9NWF4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms