Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SMCO4Q9NRQ5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SMCO4Q9NRQ5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 AC092720.2-201ENST00000602388 1665 ntBASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 CROCCP3-202ENST00000420820 1947 ntBASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 DUX4L4-201ENST00000566884 1269 ntBASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 AC011551.1-201ENST00000614101 683 ntBASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 TREX1-205ENST00000625293 1783 ntBASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.76■□□□□ 0.11
SMCO4Q9NRQ5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 TNRC18P3-201ENST00000441896 2691 ntBASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.75■□□□□ 0.11
SMCO4Q9NRQ5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMCO4Q9NRQ5 MKRN4P-201ENST00000444706 1521 ntBASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMCO4Q9NRQ5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms