Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC52A3Q9NQ40 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 MYCNOS-205ENST00000641950 531 ntBASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 KRT8P17-201ENST00000453110 1448 ntBASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 AC093503.3-201ENST00000624917 2352 ntBASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SLC52A3Q9NQ40 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 AL591742.1-201ENST00000604433 565 ntBASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 AL032819.2-201ENST00000624543 2162 ntBASIC18.95■□□□□ 0.62
SLC52A3Q9NQ40 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 KRT19P1-201ENST00000405746 1186 ntBASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 AC016405.3-201ENST00000607710 860 ntBASIC18.94■□□□□ 0.62
SLC52A3Q9NQ40 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms