Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.94■□□□□ 0.94
CD248Q9HCU0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.94■□□□□ 0.94
CD248Q9HCU0 AP003097.1-201ENST00000530657 1135 ntBASIC20.94■□□□□ 0.94
CD248Q9HCU0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
CD248Q9HCU0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.94■□□□□ 0.94
CD248Q9HCU0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD248Q9HCU0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.93■□□□□ 0.94
CD248Q9HCU0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 HLA-B-256ENST00000639848 1089 ntBASIC20.93■□□□□ 0.94
CD248Q9HCU0 AC073648.6-201ENST00000641589 218 ntBASIC20.93■□□□□ 0.94
CD248Q9HCU0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD248Q9HCU0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 AC060766.5-201ENST00000590539 871 ntBASIC20.92■□□□□ 0.94
CD248Q9HCU0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD248Q9HCU0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
CD248Q9HCU0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD248Q9HCU0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CD248Q9HCU0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 AL589743.5-201ENST00000616611 1050 ntBASIC20.9■□□□□ 0.94
CD248Q9HCU0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms