Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NSUN3Q9H649 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NSUN3Q9H649 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.27■■□□□ 1
NSUN3Q9H649 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
NSUN3Q9H649 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.27■■□□□ 1
NSUN3Q9H649 LIN28AP1-201ENST00000429574 405 ntBASIC21.27■■□□□ 1
NSUN3Q9H649 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 WWOX-216ENST00000569818 525 ntBASIC21.27■■□□□ 1
NSUN3Q9H649 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NSUN3Q9H649 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NSUN3Q9H649 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NSUN3Q9H649 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.27■■□□□ 1
NSUN3Q9H649 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NSUN3Q9H649 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NSUN3Q9H649 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NSUN3Q9H649 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 AC010203.1-204ENST00000548782 407 ntBASIC21.26■□□□□ 0.99
NSUN3Q9H649 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSUN3Q9H649 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NSUN3Q9H649 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 ATP5G1P1-201ENST00000448724 379 ntBASIC21.25■□□□□ 0.99
NSUN3Q9H649 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.25■□□□□ 0.99
NSUN3Q9H649 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NSUN3Q9H649 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NSUN3Q9H649 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NSUN3Q9H649 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NSUN3Q9H649 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NSUN3Q9H649 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 AC006011.2-201ENST00000621313 1158 ntBASIC21.23■□□□□ 0.99
NSUN3Q9H649 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NSUN3Q9H649 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.23■□□□□ 0.99
NSUN3Q9H649 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NSUN3Q9H649 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.22■□□□□ 0.99
NSUN3Q9H649 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NSUN3Q9H649 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.22■□□□□ 0.99
NSUN3Q9H649 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.22■□□□□ 0.99
NSUN3Q9H649 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
NSUN3Q9H649 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms