Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 AC105265.2-201ENST00000467189 838 ntBASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 KRT18P20-201ENST00000548986 1279 ntBASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42EP4Q9H3Q1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 AC027612.3-201ENST00000413684 1047 ntBASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42EP4Q9H3Q1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 AC093503.3-201ENST00000624917 2352 ntBASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42EP4Q9H3Q1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42EP4Q9H3Q1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms