Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS11Q9H270 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 MIR638-201ENST00000385237 100 ntBASIC20.1■□□□□ 0.81
VPS11Q9H270 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS11Q9H270 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.1■□□□□ 0.81
VPS11Q9H270 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.1■□□□□ 0.81
VPS11Q9H270 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS11Q9H270 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS11Q9H270 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.1■□□□□ 0.81
VPS11Q9H270 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.09■□□□□ 0.81
VPS11Q9H270 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.09■□□□□ 0.81
VPS11Q9H270 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS11Q9H270 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS11Q9H270 FAM21FP-204ENST00000608637 956 ntBASIC20.09■□□□□ 0.81
VPS11Q9H270 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS11Q9H270 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS11Q9H270 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.09■□□□□ 0.81
VPS11Q9H270 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
VPS11Q9H270 AL691432.2-201ENST00000607222 2038 ntBASIC20.09■□□□□ 0.81
VPS11Q9H270 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VPS11Q9H270 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 AC019069.1-201ENST00000610008 1333 ntBASIC20.08■□□□□ 0.81
VPS11Q9H270 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS11Q9H270 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS11Q9H270 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS11Q9H270 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS11Q9H270 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
VPS11Q9H270 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS11Q9H270 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS11Q9H270 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS11Q9H270 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS11Q9H270 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS11Q9H270 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
VPS11Q9H270 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS11Q9H270 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VPS11Q9H270 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS11Q9H270 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VPS11Q9H270 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
VPS11Q9H270 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 SLC7A5P1-201ENST00000568957 537 ntBASIC20.07■□□□□ 0.8
VPS11Q9H270 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.07■□□□□ 0.8
VPS11Q9H270 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.07■□□□□ 0.8
VPS11Q9H270 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
VPS11Q9H270 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VPS11Q9H270 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS11Q9H270 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS11Q9H270 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS11Q9H270 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms