Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CDH23Q9H251 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH23Q9H251 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.44■■□□□ 1.02
CDH23Q9H251 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH23Q9H251 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.44■■□□□ 1.02
CDH23Q9H251 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH23Q9H251 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH23Q9H251 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.43■■□□□ 1.02
CDH23Q9H251 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH23Q9H251 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.43■■□□□ 1.02
CDH23Q9H251 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CDH23Q9H251 AL691432.3-201ENST00000621860 400 ntBASIC21.43■■□□□ 1.02
CDH23Q9H251 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH23Q9H251 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CDH23Q9H251 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH23Q9H251 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 B3GAT3P1-201ENST00000471720 806 ntBASIC21.42■■□□□ 1.02
CDH23Q9H251 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH23Q9H251 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH23Q9H251 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH23Q9H251 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CDH23Q9H251 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDH23Q9H251 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH23Q9H251 CR392000.1-201ENST00000624770 1228 ntBASIC21.42■■□□□ 1.02
CDH23Q9H251 AL031985.4-201ENST00000642138 673 ntBASIC21.42■■□□□ 1.02
CDH23Q9H251 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH23Q9H251 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH23Q9H251 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH23Q9H251 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDH23Q9H251 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
CDH23Q9H251 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDH23Q9H251 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH23Q9H251 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 RNF152P1-201ENST00000397754 604 ntBASIC21.41■■□□□ 1.02
CDH23Q9H251 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.41■■□□□ 1.02
CDH23Q9H251 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH23Q9H251 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDH23Q9H251 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDH23Q9H251 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH23Q9H251 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH23Q9H251 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH23Q9H251 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.4■■□□□ 1.02
CDH23Q9H251 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CDH23Q9H251 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH23Q9H251 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH23Q9H251 AC128688.1-201ENST00000487626 519 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 AC130371.2-201ENST00000619443 611 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 AL121906.2-201ENST00000621597 723 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH23Q9H251 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH23Q9H251 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH23Q9H251 TSPY21P-201ENST00000433481 731 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 TSPY23P-201ENST00000440136 739 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 AP002982.1-201ENST00000492365 877 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.4■■□□□ 1.02
CDH23Q9H251 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH23Q9H251 DGCR10-201ENST00000609839 495 ntBASIC21.4■■□□□ 1.02
CDH23Q9H251 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
CDH23Q9H251 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDH23Q9H251 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.39■■□□□ 1.02
CDH23Q9H251 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDH23Q9H251 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDH23Q9H251 KSR1P1-201ENST00000446298 240 ntBASIC21.39■■□□□ 1.02
CDH23Q9H251 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CDH23Q9H251 AC127496.7-201ENST00000625110 1798 ntBASIC21.39■■□□□ 1.01
CDH23Q9H251 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CDH23Q9H251 FDX1P1-201ENST00000449115 551 ntBASIC21.39■■□□□ 1.01
CDH23Q9H251 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDH23Q9H251 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.39■■□□□ 1.01
CDH23Q9H251 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDH23Q9H251 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms