Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE1Q99829 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CPNE1Q99829 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.01■□□□□ 0.79
CPNE1Q99829 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE1Q99829 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CPNE1Q99829 AC100791.3-201ENST00000617619 330 ntBASIC20.01■□□□□ 0.79
CPNE1Q99829 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CPNE1Q99829 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.01■□□□□ 0.79
CPNE1Q99829 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE1Q99829 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20■□□□□ 0.79
CPNE1Q99829 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPNE1Q99829 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 GAS2L1P2-201ENST00000436355 1356 ntBASIC20■□□□□ 0.79
CPNE1Q99829 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20■□□□□ 0.79
CPNE1Q99829 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20■□□□□ 0.79
CPNE1Q99829 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CPNE1Q99829 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CPNE1Q99829 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPNE1Q99829 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CPNE1Q99829 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE1Q99829 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
CPNE1Q99829 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CPNE1Q99829 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE1Q99829 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CPNE1Q99829 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CPNE1Q99829 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CPNE1Q99829 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE1Q99829 TREX1-205ENST00000625293 1783 ntBASIC19.99■□□□□ 0.79
CPNE1Q99829 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 MCRIP2P1-201ENST00000394346 511 ntBASIC19.99■□□□□ 0.79
CPNE1Q99829 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE1Q99829 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE1Q99829 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE1Q99829 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE1Q99829 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE1Q99829 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.98■□□□□ 0.79
CPNE1Q99829 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 RARRES2P4-201ENST00000514074 484 ntBASIC19.98■□□□□ 0.79
CPNE1Q99829 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.98■□□□□ 0.79
CPNE1Q99829 AC137761.2-201ENST00000561729 223 ntBASIC19.98■□□□□ 0.79
CPNE1Q99829 AC145350.3-201ENST00000569033 163 ntBASIC19.98■□□□□ 0.79
CPNE1Q99829 MIR6821-201ENST00000617625 74 ntBASIC19.98■□□□□ 0.79
CPNE1Q99829 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CPNE1Q99829 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 KRT8P17-201ENST00000453110 1448 ntBASIC19.98■□□□□ 0.79
CPNE1Q99829 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CPNE1Q99829 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CPNE1Q99829 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE1Q99829 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CPNE1Q99829 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE1Q99829 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE1Q99829 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE1Q99829 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPNE1Q99829 AC009237.14-201ENST00000609975 1594 ntBASIC19.97■□□□□ 0.79
CPNE1Q99829 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CPNE1Q99829 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPNE1Q99829 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
CPNE1Q99829 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE1Q99829 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE1Q99829 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms