Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 MIR1238-201ENST00000408483 83 ntBASIC18.18■□□□□ 0.5
SPENQ96T58 AL355355.2-201ENST00000442321 338 ntBASIC18.18■□□□□ 0.5
SPENQ96T58 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
SPENQ96T58 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.18■□□□□ 0.5
SPENQ96T58 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.18■□□□□ 0.5
SPENQ96T58 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.18■□□□□ 0.5
SPENQ96T58 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SPENQ96T58 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.18■□□□□ 0.5
SPENQ96T58 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.18■□□□□ 0.5
SPENQ96T58 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SPENQ96T58 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SPENQ96T58 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.17■□□□□ 0.5
SPENQ96T58 AC005229.4-201ENST00000610085 2198 ntBASIC18.17■□□□□ 0.5
SPENQ96T58 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 FITM1-202ENST00000559294 800 ntBASIC18.17■□□□□ 0.5
SPENQ96T58 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SPENQ96T58 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPENQ96T58 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.17■□□□□ 0.5
SPENQ96T58 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.17■□□□□ 0.5
SPENQ96T58 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 AC011484.1-201ENST00000377652 1995 ntBASIC18.16■□□□□ 0.5
SPENQ96T58 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.16■□□□□ 0.5
SPENQ96T58 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 NIFKP9-201ENST00000419265 221 ntBASIC18.16■□□□□ 0.5
SPENQ96T58 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.16■□□□□ 0.5
SPENQ96T58 AC087388.1-201ENST00000571370 1112 ntBASIC18.16■□□□□ 0.5
SPENQ96T58 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 AC104076.2-201ENST00000448912 469 ntBASIC18.16■□□□□ 0.5
SPENQ96T58 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.16■□□□□ 0.5
SPENQ96T58 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SPENQ96T58 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
SPENQ96T58 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
SPENQ96T58 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPENQ96T58 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SPENQ96T58 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.15■□□□□ 0.5
SPENQ96T58 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SPENQ96T58 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.15■□□□□ 0.5
SPENQ96T58 KRT16P1-201ENST00000399124 1418 ntBASIC18.15■□□□□ 0.5
SPENQ96T58 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPENQ96T58 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.15■□□□□ 0.5
SPENQ96T58 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.15■□□□□ 0.5
SPENQ96T58 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SPENQ96T58 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.14■□□□□ 0.5
SPENQ96T58 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SPENQ96T58 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SPENQ96T58 AL137013.1-201ENST00000432946 1228 ntBASIC18.14■□□□□ 0.5
SPENQ96T58 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SPENQ96T58 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.14■□□□□ 0.5
SPENQ96T58 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SPENQ96T58 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SPENQ96T58 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.14■□□□□ 0.5
SPENQ96T58 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.14■□□□□ 0.49
SPENQ96T58 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.14■□□□□ 0.49
SPENQ96T58 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.14■□□□□ 0.49
SPENQ96T58 FAM87A-204ENST00000613235 858 ntBASIC18.14■□□□□ 0.49
SPENQ96T58 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SPENQ96T58 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms