Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 BX276092.2-201ENST00000417668 665 ntBASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MS4A4EQ96PG1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 HLA-G-202ENST00000376815 851 ntBASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 HLA-G-203ENST00000376818 1127 ntBASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 AL691432.2-201ENST00000607222 2038 ntBASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MS4A4EQ96PG1 KRT16P6-202ENST00000425692 1426 ntBASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A4EQ96PG1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 AC083906.2-201ENST00000511578 360 ntBASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 AC023632.3-201ENST00000521633 145 ntBASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.65■□□□□ 0.58
MS4A4EQ96PG1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MS4A4EQ96PG1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.64■□□□□ 0.58
MS4A4EQ96PG1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
MS4A4EQ96PG1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MS4A4EQ96PG1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 MIPEPP3-201ENST00000412105 444 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms