Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C9orf72Q96LT7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 AC098818.2-201ENST00000564925 2320 ntBASIC20.56■□□□□ 0.88
C9orf72Q96LT7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 AP001160.3-201ENST00000601484 763 ntBASIC20.56■□□□□ 0.88
C9orf72Q96LT7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C9orf72Q96LT7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 KRT8P36-201ENST00000489121 1440 ntBASIC20.55■□□□□ 0.88
C9orf72Q96LT7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C9orf72Q96LT7 AC018445.3-201ENST00000624177 1945 ntBASIC20.55■□□□□ 0.88
C9orf72Q96LT7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 MFSD11-216ENST00000590393 1141 ntBASIC20.54■□□□□ 0.88
C9orf72Q96LT7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C9orf72Q96LT7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
C9orf72Q96LT7 HLA-L-209ENST00000420110 1011 ntBASIC20.53■□□□□ 0.88
C9orf72Q96LT7 AC091799.1-201ENST00000422823 811 ntBASIC20.53■□□□□ 0.88
C9orf72Q96LT7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms