Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.31■□□□□ 0.84
SHDQ96IW2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.31■□□□□ 0.84
SHDQ96IW2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.31■□□□□ 0.84
SHDQ96IW2 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.31■□□□□ 0.84
SHDQ96IW2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.31■□□□□ 0.84
SHDQ96IW2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.31■□□□□ 0.84
SHDQ96IW2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.31■□□□□ 0.84
SHDQ96IW2 AL445675.2-201ENST00000620291 557 ntBASIC20.31■□□□□ 0.84
SHDQ96IW2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.31■□□□□ 0.84
SHDQ96IW2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHDQ96IW2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHDQ96IW2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.3■□□□□ 0.84
SHDQ96IW2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
SHDQ96IW2 AC242852.2-201ENST00000615738 1807 ntBASIC20.3■□□□□ 0.84
SHDQ96IW2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 UPK3BP1-201ENST00000428678 509 ntBASIC20.3■□□□□ 0.84
SHDQ96IW2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 ECEL1P2-202ENST00000465689 757 ntBASIC20.3■□□□□ 0.84
SHDQ96IW2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.3■□□□□ 0.84
SHDQ96IW2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.3■□□□□ 0.84
SHDQ96IW2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHDQ96IW2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.29■□□□□ 0.84
SHDQ96IW2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SHDQ96IW2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHDQ96IW2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHDQ96IW2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.29■□□□□ 0.84
SHDQ96IW2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHDQ96IW2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHDQ96IW2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SHDQ96IW2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.28■□□□□ 0.84
SHDQ96IW2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.28■□□□□ 0.84
SHDQ96IW2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.28■□□□□ 0.84
SHDQ96IW2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.28■□□□□ 0.84
SHDQ96IW2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.28■□□□□ 0.84
SHDQ96IW2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SHDQ96IW2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SHDQ96IW2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
SHDQ96IW2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SHDQ96IW2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHDQ96IW2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.27■□□□□ 0.84
SHDQ96IW2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.27■□□□□ 0.84
SHDQ96IW2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHDQ96IW2 AC063952.2-201ENST00000498792 1227 ntBASIC20.27■□□□□ 0.84
SHDQ96IW2 AC097488.1-201ENST00000507834 756 ntBASIC20.27■□□□□ 0.84
SHDQ96IW2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 AC022616.7-201ENST00000525383 220 ntBASIC20.27■□□□□ 0.84
SHDQ96IW2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.27■□□□□ 0.84
SHDQ96IW2 C1QL1P1-201ENST00000568105 661 ntBASIC20.27■□□□□ 0.84
SHDQ96IW2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.27■□□□□ 0.84
SHDQ96IW2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.27■□□□□ 0.84
SHDQ96IW2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHDQ96IW2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHDQ96IW2 AP006587.1-201ENST00000534129 1502 ntBASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms