Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC39Q96DD0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 RARRES2P4-201ENST00000514074 484 ntBASIC20.21■□□□□ 0.83
LRRC39Q96DD0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC39Q96DD0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 KRT16P6-202ENST00000425692 1426 ntBASIC20.2■□□□□ 0.82
LRRC39Q96DD0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 AL031963.3-201ENST00000606441 850 ntBASIC20.2■□□□□ 0.82
LRRC39Q96DD0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC39Q96DD0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRRC39Q96DD0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 AC018445.3-201ENST00000624177 1945 ntBASIC20.18■□□□□ 0.82
LRRC39Q96DD0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 AC005332.7-201ENST00000614046 2005 ntBASIC20.18■□□□□ 0.82
LRRC39Q96DD0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 KRT8P20-201ENST00000423953 1409 ntBASIC20.18■□□□□ 0.82
LRRC39Q96DD0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC39Q96DD0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 MIR6821-201ENST00000617625 74 ntBASIC20.17■□□□□ 0.82
LRRC39Q96DD0 AC105020.6-201ENST00000621523 1217 ntBASIC20.17■□□□□ 0.82
LRRC39Q96DD0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC39Q96DD0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms