Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.69■□□□□ 0.42
GCN1Q92616 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GCN1Q92616 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.69■□□□□ 0.42
GCN1Q92616 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.69■□□□□ 0.42
GCN1Q92616 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 AL023803.3-201ENST00000615559 522 ntBASIC17.69■□□□□ 0.42
GCN1Q92616 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCN1Q92616 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GCN1Q92616 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.69■□□□□ 0.42
GCN1Q92616 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 AC010653.2-201ENST00000623505 997 ntBASIC17.68■□□□□ 0.42
GCN1Q92616 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCN1Q92616 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GCN1Q92616 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 ZNF444P1-201ENST00000559497 298 ntBASIC17.68■□□□□ 0.42
GCN1Q92616 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCN1Q92616 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.68■□□□□ 0.42
GCN1Q92616 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCN1Q92616 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GCN1Q92616 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.67■□□□□ 0.42
GCN1Q92616 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.67■□□□□ 0.42
GCN1Q92616 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.67■□□□□ 0.42
GCN1Q92616 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GCN1Q92616 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GCN1Q92616 AC239800.4-201ENST00000603712 296 ntBASIC17.67■□□□□ 0.42
GCN1Q92616 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GCN1Q92616 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
GCN1Q92616 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.67■□□□□ 0.42
GCN1Q92616 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.67■□□□□ 0.42
GCN1Q92616 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCN1Q92616 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.66■□□□□ 0.42
GCN1Q92616 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.66■□□□□ 0.42
GCN1Q92616 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GCN1Q92616 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.66■□□□□ 0.42
GCN1Q92616 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GCN1Q92616 AC087742.1-201ENST00000575880 1738 ntBASIC17.66■□□□□ 0.42
GCN1Q92616 NUS1P1-201ENST00000446295 882 ntBASIC17.66■□□□□ 0.42
GCN1Q92616 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.66■□□□□ 0.42
GCN1Q92616 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.66■□□□□ 0.42
GCN1Q92616 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.66■□□□□ 0.42
GCN1Q92616 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.66■□□□□ 0.42
GCN1Q92616 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCN1Q92616 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCN1Q92616 SPDYE13P-201ENST00000445314 798 ntBASIC17.65■□□□□ 0.42
GCN1Q92616 KRT16P4-201ENST00000453883 522 ntBASIC17.65■□□□□ 0.42
GCN1Q92616 POLD2P1-201ENST00000511220 997 ntBASIC17.65■□□□□ 0.42
GCN1Q92616 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.65■□□□□ 0.42
GCN1Q92616 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
GCN1Q92616 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
GCN1Q92616 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.65■□□□□ 0.42
GCN1Q92616 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCN1Q92616 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCN1Q92616 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
GCN1Q92616 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GCN1Q92616 KRT18P31-201ENST00000506277 1292 ntBASIC17.65■□□□□ 0.42
GCN1Q92616 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.65■□□□□ 0.42
GCN1Q92616 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GCN1Q92616 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GCN1Q92616 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GCN1Q92616 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GCN1Q92616 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.64■□□□□ 0.41
GCN1Q92616 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GCN1Q92616 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GCN1Q92616 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms