Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 LINC01521-201ENST00000504184 1943 ntBASIC23.64■■□□□ 1.37
STAG1Q8WVM7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
STAG1Q8WVM7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 POM121L13P-201ENST00000422362 380 ntBASIC23.63■■□□□ 1.37
STAG1Q8WVM7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.63■■□□□ 1.37
STAG1Q8WVM7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 GCSHP5-201ENST00000443090 522 ntBASIC23.62■■□□□ 1.37
STAG1Q8WVM7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
STAG1Q8WVM7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 RPS2P52-201ENST00000469610 820 ntBASIC23.61■■□□□ 1.37
STAG1Q8WVM7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
STAG1Q8WVM7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 KRT16P6-202ENST00000425692 1426 ntBASIC23.6■■□□□ 1.37
STAG1Q8WVM7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.6■■□□□ 1.37
STAG1Q8WVM7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 AC124283.5-201ENST00000624661 1809 ntBASIC23.59■■□□□ 1.37
STAG1Q8WVM7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 AC142381.4-202ENST00000563973 229 ntBASIC23.59■■□□□ 1.37
STAG1Q8WVM7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms