Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 LTB4R2-202ENST00000528054 3092 ntBASIC13□□□□□ -0.33
SMIM11BQ8TCY0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 LINC01465-201ENST00000408887 1940 ntBASIC13□□□□□ -0.33
SMIM11BQ8TCY0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM11BQ8TCY0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 KRT125P-201ENST00000546827 989 ntBASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ABHD17AP5-201ENST00000580133 923 ntBASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM11BQ8TCY0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 AP005435.1-201ENST00000529293 1178 ntBASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM11BQ8TCY0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM11BQ8TCY0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM11BQ8TCY0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms