Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 KSR1P1-201ENST00000446298 240 ntBASIC15.64■□□□□ 0.09
LINC01006Q8NI28 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 RN7SL850P-201ENST00000579959 291 ntBASIC15.64■□□□□ 0.09
LINC01006Q8NI28 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 AP000525.1-201ENST00000608286 694 ntBASIC15.64■□□□□ 0.09
LINC01006Q8NI28 MIR6786-201ENST00000616843 113 ntBASIC15.64■□□□□ 0.09
LINC01006Q8NI28 CR392000.1-201ENST00000624770 1228 ntBASIC15.64■□□□□ 0.09
LINC01006Q8NI28 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01006Q8NI28 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 KRT8P17-201ENST00000453110 1448 ntBASIC15.62■□□□□ 0.09
LINC01006Q8NI28 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 MIR1238-201ENST00000408483 83 ntBASIC15.62■□□□□ 0.09
LINC01006Q8NI28 NIFKP9-201ENST00000419265 221 ntBASIC15.62■□□□□ 0.09
LINC01006Q8NI28 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 AC005363.2-201ENST00000618631 242 ntBASIC15.62■□□□□ 0.09
LINC01006Q8NI28 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 AL121603.2-201ENST00000557373 2117 ntBASIC15.62■□□□□ 0.09
LINC01006Q8NI28 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01006Q8NI28 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 KRT16P1-201ENST00000399124 1418 ntBASIC15.61■□□□□ 0.09
LINC01006Q8NI28 KRT8P9-201ENST00000558927 1449 ntBASIC15.61■□□□□ 0.09
LINC01006Q8NI28 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 EP400NL-214ENST00000641289 2402 ntBASIC15.61■□□□□ 0.09
LINC01006Q8NI28 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 AC116562.2-201ENST00000507042 360 ntBASIC15.61■□□□□ 0.09
LINC01006Q8NI28 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 AC092865.7-201ENST00000641832 219 ntBASIC15.61■□□□□ 0.09
LINC01006Q8NI28 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01006Q8NI28 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms