Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 MIR939-201ENST00000401314 82 ntBASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 AC142381.2-201ENST00000566120 298 ntBASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFWD2Q8NHY2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 AL031432.3-201ENST00000607698 485 ntBASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 AL136967.2-201ENST00000623968 743 ntBASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RFWD2Q8NHY2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 RASA4CP-201ENST00000424092 1398 ntBASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 AC026471.1-201ENST00000564629 3026 ntBASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFWD2Q8NHY2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 AC091305.1-201ENST00000479476 895 ntBASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 AC005837.3-201ENST00000612163 286 ntBASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 AC116050.2-201ENST00000612102 1779 ntBASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD2Q8NHY2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms