Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 BX119927.1-201ENST00000636596 1552 ntBASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01555Q8NAE3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 AC124283.5-201ENST00000624661 1809 ntBASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01555Q8NAE3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 AC099778.1-201ENST00000568593 1911 ntBASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 POM121L13P-201ENST00000422362 380 ntBASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 FAM201B-201ENST00000458407 597 ntBASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01555Q8NAE3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 AC233263.1-201ENST00000578059 224 ntBASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 AC006058.3-201ENST00000606217 1069 ntBASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01555Q8NAE3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 PKD1P6-201ENST00000343738 4769 ntBASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 RPS2P52-201ENST00000469610 820 ntBASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LINC01555Q8NAE3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms