Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 KRT8P17-201ENST00000453110 1448 ntBASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN19Q8N6F1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN19Q8N6F1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 BX119927.1-201ENST00000636596 1552 ntBASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CLDN19Q8N6F1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 KRT8P20-201ENST00000423953 1409 ntBASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AC023632.3-201ENST00000521633 145 ntBASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AL031963.3-201ENST00000606441 850 ntBASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN19Q8N6F1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 AL691432.2-201ENST00000607222 2038 ntBASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN19Q8N6F1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms