Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01561Q8N1V8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 AC019069.1-201ENST00000610008 1333 ntBASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01561Q8N1V8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC01561Q8N1V8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 KRT16P6-202ENST00000425692 1426 ntBASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 AC142381.2-201ENST00000566120 298 ntBASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LINC01561Q8N1V8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 Z82202.1-201ENST00000623446 1880 ntBASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01561Q8N1V8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms