Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
SIX5Q8N196 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SIX5Q8N196 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SIX5Q8N196 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.53■□□□□ 0.88
SIX5Q8N196 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.53■□□□□ 0.88
SIX5Q8N196 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.53■□□□□ 0.88
SIX5Q8N196 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.53■□□□□ 0.88
SIX5Q8N196 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.53■□□□□ 0.88
SIX5Q8N196 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SIX5Q8N196 AC006011.2-201ENST00000621313 1158 ntBASIC20.53■□□□□ 0.88
SIX5Q8N196 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SIX5Q8N196 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.53■□□□□ 0.88
SIX5Q8N196 KRT16P1-201ENST00000399124 1418 ntBASIC20.53■□□□□ 0.88
SIX5Q8N196 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX5Q8N196 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX5Q8N196 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SIX5Q8N196 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
SIX5Q8N196 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SIX5Q8N196 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.52■□□□□ 0.88
SIX5Q8N196 NIFKP9-201ENST00000419265 221 ntBASIC20.52■□□□□ 0.88
SIX5Q8N196 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX5Q8N196 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.52■□□□□ 0.88
SIX5Q8N196 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
SIX5Q8N196 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.52■□□□□ 0.88
SIX5Q8N196 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.52■□□□□ 0.88
SIX5Q8N196 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SIX5Q8N196 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SIX5Q8N196 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SIX5Q8N196 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX5Q8N196 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIX5Q8N196 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SIX5Q8N196 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SIX5Q8N196 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SIX5Q8N196 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.51■□□□□ 0.87
SIX5Q8N196 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.51■□□□□ 0.87
SIX5Q8N196 UPK3BP1-201ENST00000428678 509 ntBASIC20.51■□□□□ 0.87
SIX5Q8N196 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.51■□□□□ 0.87
SIX5Q8N196 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.51■□□□□ 0.87
SIX5Q8N196 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SIX5Q8N196 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
SIX5Q8N196 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX5Q8N196 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.5■□□□□ 0.87
SIX5Q8N196 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.5■□□□□ 0.87
SIX5Q8N196 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.5■□□□□ 0.87
SIX5Q8N196 C1orf229-201ENST00000623686 2258 ntBASIC20.5■□□□□ 0.87
SIX5Q8N196 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.5■□□□□ 0.87
SIX5Q8N196 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SIX5Q8N196 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.5■□□□□ 0.87
SIX5Q8N196 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SIX5Q8N196 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX5Q8N196 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SIX5Q8N196 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIX5Q8N196 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.49■□□□□ 0.87
SIX5Q8N196 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIX5Q8N196 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIX5Q8N196 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.49■□□□□ 0.87
SIX5Q8N196 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.49■□□□□ 0.87
SIX5Q8N196 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
SIX5Q8N196 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.49■□□□□ 0.87
SIX5Q8N196 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.49■□□□□ 0.87
SIX5Q8N196 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.49■□□□□ 0.87
SIX5Q8N196 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.48■□□□□ 0.87
SIX5Q8N196 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms