Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 BX119927.1-201ENST00000636596 1552 ntBASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 AC007322.1-201ENST00000426983 750 ntBASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LINC00346Q8IVM7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00346Q8IVM7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.71■□□□□ 0.42
LINC00346Q8IVM7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00346Q8IVM7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00346Q8IVM7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00346Q8IVM7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 AL355472.2-201ENST00000422958 438 ntBASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 AC069236.1-201ENST00000604339 616 ntBASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 AC231657.2-201ENST00000624556 255 ntBASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00346Q8IVM7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 AC008694.1-202ENST00000636953 945 ntBASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00346Q8IVM7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms