Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 TERF1P5-201ENST00000477545 1207 ntBASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC50Q8IVM0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC50Q8IVM0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC50Q8IVM0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC50Q8IVM0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC50Q8IVM0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC50Q8IVM0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 PGM5P4-201ENST00000421970 445 ntBASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC50Q8IVM0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 AL591742.1-201ENST00000604433 565 ntBASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC50Q8IVM0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AC137761.2-201ENST00000561729 223 ntBASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AC145350.3-201ENST00000569033 163 ntBASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AC087623.3-201ENST00000607047 1098 ntBASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC50Q8IVM0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms