Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 BX005040.4-201ENST00000637145 1518 ntBASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD2Q8IV50 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD2Q8IV50 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD2Q8IV50 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 UNC93B8-201ENST00000511903 705 ntBASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 AC068880.1-201ENST00000507289 2297 ntBASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD2Q8IV50 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms