Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 AC116562.2-201ENST00000507042 360 ntBASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 AC073195.1-201ENST00000607241 877 ntBASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZFHX4Q86UP3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 KRT18P13-201ENST00000400056 1290 ntBASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.9■□□□□ 0.62
ZFHX4Q86UP3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZFHX4Q86UP3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZFHX4Q86UP3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 AC116407.4-201ENST00000623319 1061 ntBASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.61
ZFHX4Q86UP3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 RNF152P1-201ENST00000397754 604 ntBASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZFHX4Q86UP3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZFHX4Q86UP3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 KRT16P1-201ENST00000399124 1418 ntBASIC18.86■□□□□ 0.61
ZFHX4Q86UP3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ZFHX4Q86UP3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZFHX4Q86UP3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ZFHX4Q86UP3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms