Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 AC060766.5-201ENST00000590539 871 ntBASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 AC092368.3-202ENST00000574180 1591 ntBASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD3Q7Z3D4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 RNA5SP413-201ENST00000516373 109 ntBASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD3Q7Z3D4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 AC023632.3-201ENST00000521633 145 ntBASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 AL031963.3-201ENST00000606441 850 ntBASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYSMD3Q7Z3D4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 PNMA6B-201ENST00000538162 1200 ntBASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.08■□□□□ 0.81
LYSMD3Q7Z3D4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 KRT8P17-201ENST00000453110 1448 ntBASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYSMD3Q7Z3D4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 KRT8P20-201ENST00000423953 1409 ntBASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LYSMD3Q7Z3D4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms